Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10863864	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10863865	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11119620	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11119625	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11119626	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11485201	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11580309	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12058816	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12059106	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12059948	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12065074	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12092880	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1343150	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17016986	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2358094	0.90[AMR][1000 genomes]
rs28402221	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56336842	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6666924	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6668151	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67483865	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9730476	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832503	chr1:210948760-211103163	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv4398	chr1:211034582-211079117	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv873154	chr1:211057697-211117197	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211056800-211078800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr1:211058400-211077400	Weak transcription	HSMMtube	muscle
3	chr1:211058600-211067200	Weak transcription	HSMM	muscle

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