Variant report

Variant	rs10866118
Chromosome Location	chr4:62284634-62284635
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs6835059	0.80[AFR][1000 genomes]
rs7683598	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs7698624	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879075	chr4:62124531-62354791	Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv868844	chr4:62241702-62497248	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv879076	chr4:62251077-62354791	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2753138	chr4:62271444-62442507	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv523840	chr4:62274626-62289032	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	nsv471813	chr4:62283682-62285447	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv4190	chr4:62283911-62285350	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	nsv822568	chr4:62283922-62284700	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	nsv822569	chr4:62283922-62284957	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	nsv822570	chr4:62283922-62285428	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3467138	chr4:62283995-62285384	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3504130	chr4:62284004-62285424	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3467139	chr4:62284047-62285347	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3467140	chr4:62284051-62285350	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3504131	chr4:62284073-62285352	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv1820017	chr4:62284099-62285199	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv1843088	chr4:62284099-62285199	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv1846505	chr4:62284099-62285199	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv1848951	chr4:62284099-62285199	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv1849835	chr4:62284099-62285199	Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv1822935	chr4:62284099-62285376	Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv13623	chr4:62284123-62285279	Weak transcription	n/a	n/a	inside rSNPs	diseases
23	esv3467142	chr4:62284130-62285279	Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3504132	chr4:62284130-62285279	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62273400-62290400	Weak transcription	Fetal Stomach	stomach
2	chr4:62274200-62288200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr4:62283000-62289400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr4:62284200-62289800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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