Variant report

Variant	rs10868860
Chromosome Location	chr9:73224779-73224780
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10868881	0.82[AFR][1000 genomes]
rs11142536	0.88[EUR][1000 genomes]
rs11142554	0.88[AFR][1000 genomes]
rs11142556	0.88[AFR][1000 genomes]
rs11142557	0.88[AFR][1000 genomes]
rs11142558	0.88[AFR][1000 genomes]
rs11142561	0.82[AFR][1000 genomes]
rs11142565	0.82[AFR][1000 genomes]
rs11142566	0.82[AFR][1000 genomes]
rs11142569	0.82[AFR][1000 genomes]
rs11142580	0.82[AFR][1000 genomes]
rs11142584	0.82[AFR][1000 genomes]
rs11142585	0.82[AFR][1000 genomes]
rs1156243	0.82[AFR][1000 genomes]
rs11790001	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12552891	0.82[AFR][1000 genomes]
rs12684992	0.82[AFR][1000 genomes]
rs13293360	0.82[AFR][1000 genomes]
rs13298241	0.82[AFR][1000 genomes]
rs13298973	0.82[AFR][1000 genomes]
rs1571329	0.87[CEU][hapmap];0.82[AFR][1000 genomes]
rs1571330	0.82[AFR][1000 genomes]
rs17460690	0.94[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1831144	0.87[CEU][hapmap];0.82[AFR][1000 genomes]
rs1854273	0.82[AFR][1000 genomes]
rs34009627	0.82[AFR][1000 genomes]
rs34806905	0.82[AFR][1000 genomes]
rs4265245	0.82[AFR][1000 genomes]
rs55993605	0.82[AFR][1000 genomes]
rs56201767	0.82[AFR][1000 genomes]
rs56335964	0.81[EUR][1000 genomes]

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73206600-73227800	Weak transcription	Aorta	Aorta
2	chr9:73215800-73236800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr9:73216000-73227600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr9:73217000-73230200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr9:73217400-73231200	Weak transcription	Fetal Brain Female	brain
6	chr9:73217400-73233400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr9:73217400-73242400	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr9:73217600-73236400	Weak transcription	Fetal Kidney	kidney
9	chr9:73217800-73228600	Weak transcription	Brain Anterior Caudate	brain
10	chr9:73218000-73228400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr9:73218000-73229800	Weak transcription	Fetal Brain Male	brain
12	chr9:73219800-73228000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr9:73220400-73227600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr9:73222000-73225600	Enhancers	Psoas Muscle	Psoas
15	chr9:73222400-73225400	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr9:73222600-73226000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr9:73223200-73225000	Weak transcription	Small Intestine	intestine
18	chr9:73223400-73225200	Enhancers	Right Atrium	heart
19	chr9:73223400-73228400	Weak transcription	Left Ventricle	heart
20	chr9:73223600-73225400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr9:73223600-73230000	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr9:73223800-73225400	Enhancers	NHDF-Ad	bronchial
23	chr9:73224000-73225000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr9:73224000-73225200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr9:73224000-73225200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr9:73224000-73225200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr9:73224000-73225200	Enhancers	HSMMtube	muscle
28	chr9:73224000-73225200	Enhancers	NH-A	brain
29	chr9:73224000-73225200	Enhancers	NHLF	lung
30	chr9:73224000-73225200	Enhancers	Osteobl	bone
31	chr9:73224000-73225600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr9:73224200-73224800	Enhancers	HMEC	breast
33	chr9:73224200-73225200	Enhancers	Muscle Satellite Cultured Cells	--
34	chr9:73224200-73225200	Enhancers	Fetal Heart	heart
35	chr9:73224400-73224800	Enhancers	Brain Angular Gyrus	brain
36	chr9:73224400-73224800	Enhancers	Fetal Lung	lung
37	chr9:73224400-73224800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
38	chr9:73224400-73225000	Enhancers	Adipose Nuclei	Adipose
39	chr9:73224400-73225000	Enhancers	Rectal Smooth Muscle	rectum
40	chr9:73224400-73225200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr9:73224400-73225200	Enhancers	Brain Hippocampus Middle	brain
42	chr9:73224400-73225200	Enhancers	Brain Inferior Temporal Lobe	brain
43	chr9:73224400-73225200	Enhancers	HSMM	muscle
44	chr9:73224400-73225600	Enhancers	Fetal Muscle Leg	muscle
45	chr9:73224400-73226400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
46	chr9:73224600-73224800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr9:73224600-73224800	Enhancers	Ovary	ovary
48	chr9:73224600-73225400	Enhancers	Brain Cingulate Gyrus	brain
49	chr9:73224600-73225400	Enhancers	Brain Substantia Nigra	brain
50	chr9:73224600-73226800	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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