Variant report

Variant	rs10873186
Chromosome Location	chr14:65625966-65625967
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11158580	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1959007	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65616400-65626200	Weak transcription	Spleen	Spleen
2	chr14:65623200-65626000	Enhancers	Fetal Muscle Leg	muscle
3	chr14:65623800-65626200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:65623800-65626200	Weak transcription	Esophagus	oesophagus
5	chr14:65624000-65626200	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr14:65624000-65637000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:65624000-65637200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr14:65624600-65627200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr14:65625000-65626200	Enhancers	Stomach Mucosa	stomach
10	chr14:65625000-65626400	Enhancers	Gastric	stomach
11	chr14:65625200-65626000	Enhancers	HSMM	muscle
12	chr14:65625200-65626000	Enhancers	NHDF-Ad	bronchial
13	chr14:65625200-65627400	Enhancers	Primary B cells from peripheral blood	blood
14	chr14:65625400-65637200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr14:65625800-65626000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr14:65625800-65626200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
17	chr14:65625800-65626200	Enhancers	Rectal Mucosa Donor 29	rectum
18	chr14:65625800-65626400	Enhancers	Rectal Mucosa Donor 31	rectum
19	chr14:65625800-65627400	Flanking Active TSS	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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