Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:65619490..65621692-chr14:65623555..65626108,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10873186	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158580	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65616400-65626200	Weak transcription	Spleen	Spleen
2	chr14:65620000-65625800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr14:65623200-65626000	Enhancers	Fetal Muscle Leg	muscle
4	chr14:65623800-65625400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr14:65623800-65625600	Weak transcription	HSMMtube	muscle
6	chr14:65623800-65626200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:65623800-65626200	Weak transcription	Esophagus	oesophagus
8	chr14:65624000-65625600	Weak transcription	Hela-S3	cervix
9	chr14:65624000-65625800	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr14:65624000-65625800	Enhancers	GM12878-XiMat	blood
11	chr14:65624000-65626200	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr14:65624000-65637000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr14:65624000-65637200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:65624600-65625800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:65624600-65627200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr14:65625000-65626200	Enhancers	Stomach Mucosa	stomach
17	chr14:65625000-65626400	Enhancers	Gastric	stomach
18	chr14:65625200-65625400	Enhancers	Aorta	Aorta
19	chr14:65625200-65626000	Enhancers	HSMM	muscle
20	chr14:65625200-65626000	Enhancers	NHDF-Ad	bronchial
21	chr14:65625200-65627400	Enhancers	Primary B cells from peripheral blood	blood

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