Variant report
| Variant | rs10880242 |
|---|---|
| Chromosome Location | chr12:42506798-42506799 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42471800-42524400 | Weak transcription | Esophagus | oesophagus |
| 2 | chr12:42474600-42514400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 3 | chr12:42474600-42518800 | Weak transcription | Brain Anterior Caudate | brain |
| 4 | chr12:42476000-42524400 | Weak transcription | Gastric | stomach |
| 5 | chr12:42476200-42524400 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:42476600-42523800 | Weak transcription | Hela-S3 | cervix |
| 7 | chr12:42478600-42511600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 8 | chr12:42480200-42512000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 9 | chr12:42483600-42511400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr12:42484400-42524800 | Weak transcription | Right Ventricle | heart |
| 11 | chr12:42485200-42511600 | Weak transcription | NHDF-Ad | bronchial |
| 12 | chr12:42485800-42512200 | Weak transcription | Brain Angular Gyrus | brain |
| 13 | chr12:42486000-42513000 | Weak transcription | Aorta | Aorta |
| 14 | chr12:42488400-42512000 | Weak transcription | Osteobl | bone |
| 15 | chr12:42488600-42518600 | Weak transcription | Fetal Brain Male | brain |
| 16 | chr12:42488800-42511800 | Weak transcription | HepG2 | liver |
| 17 | chr12:42490800-42511200 | Weak transcription | HSMM | muscle |
| 18 | chr12:42491400-42511200 | Weak transcription | A549 | lung |
| 19 | chr12:42492200-42511400 | Weak transcription | Adipose Nuclei | Adipose |
| 20 | chr12:42492200-42511600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 21 | chr12:42492200-42512400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 22 | chr12:42492200-42518600 | Weak transcription | K562 | blood |
| 23 | chr12:42492400-42511400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 24 | chr12:42492400-42511600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 25 | chr12:42492400-42511600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 26 | chr12:42492400-42512200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 27 | chr12:42492400-42512200 | Weak transcription | HUVEC | blood vessel |
| 28 | chr12:42492600-42511400 | Weak transcription | Dnd41 | blood |
| 29 | chr12:42492600-42511800 | Weak transcription | Primary T cells from cord blood | blood |
| 30 | chr12:42493000-42511600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 31 | chr12:42493000-42511600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 32 | chr12:42493000-42524400 | Weak transcription | Brain Substantia Nigra | brain |
| 33 | chr12:42493000-42534400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 34 | chr12:42493200-42511400 | Weak transcription | HMEC | breast |
| 35 | chr12:42493200-42518400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 36 | chr12:42493200-42519200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 37 | chr12:42497200-42518800 | Weak transcription | Psoas Muscle | Psoas |
| 38 | chr12:42498800-42513000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 39 | chr12:42499000-42516800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 40 | chr12:42499200-42512200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 41 | chr12:42499400-42518800 | Weak transcription | Fetal Kidney | kidney |
| 42 | chr12:42499800-42508000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 43 | chr12:42500400-42511200 | Weak transcription | Liver | Liver |
| 44 | chr12:42500800-42511400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 45 | chr12:42501000-42518800 | Weak transcription | Colon Smooth Muscle | Colon |
| 46 | chr12:42501200-42512200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 47 | chr12:42501400-42511800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 48 | chr12:42501800-42511400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 49 | chr12:42502200-42511400 | Weak transcription | Primary B cells from cord blood | blood |
| 50 | chr12:42502600-42511200 | Weak transcription | Primary B cells from peripheral blood | blood |
