Variant report

Variant	rs10881930
Chromosome Location	chr10:93373194-93373195
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93368114..93370333-chr10:93371852..93374475,3	K562	blood:
2	chr10:93348429..93351278-chr10:93370659..93373317,2	K562	blood:
3	chr10:93349778..93351711-chr10:93371480..93373317,2	K562	blood:
4	chr10:93367612..93370294-chr10:93370474..93375742,6	K562	blood:
5	chr10:93362637..93365388-chr10:93371389..93374177,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11186640	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv551914	chr10:93365015-93384073	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93367400-93373600	Enhancers	NHDF-Ad	bronchial
2	chr10:93368000-93388600	Weak transcription	Brain Angular Gyrus	brain
3	chr10:93368800-93373200	Weak transcription	Duodenum Mucosa	Duodenum
4	chr10:93368800-93373600	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:93368800-93373800	Weak transcription	Small Intestine	intestine
6	chr10:93369000-93373200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr10:93369000-93387600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr10:93369200-93373200	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr10:93369200-93373600	Weak transcription	Colonic Mucosa	Colon
10	chr10:93369400-93373600	Weak transcription	Adipose Nuclei	Adipose
11	chr10:93369400-93378600	Weak transcription	Fetal Intestine Small	intestine
12	chr10:93369400-93379200	Weak transcription	Liver	Liver
13	chr10:93369600-93387800	Weak transcription	Fetal Brain Male	brain
14	chr10:93369800-93373400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr10:93370400-93374200	Enhancers	Fetal Heart	heart
16	chr10:93371000-93373200	Weak transcription	NHEK	skin
17	chr10:93371000-93373400	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr10:93371200-93376800	Weak transcription	Spleen	Spleen
19	chr10:93371400-93373200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr10:93371400-93373200	Weak transcription	Aorta	Aorta
21	chr10:93371400-93373800	Weak transcription	Psoas Muscle	Psoas
22	chr10:93371400-93374400	Weak transcription	Fetal Muscle Trunk	muscle
23	chr10:93371400-93377000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr10:93371400-93381400	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr10:93371400-93383600	Weak transcription	Ovary	ovary
26	chr10:93371400-93383600	Weak transcription	Right Ventricle	heart
27	chr10:93371400-93386800	Weak transcription	Pancreas	Pancrea
28	chr10:93371600-93373400	Weak transcription	Right Atrium	heart
29	chr10:93371600-93373600	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr10:93371600-93377000	Weak transcription	Esophagus	oesophagus
31	chr10:93371800-93373200	Weak transcription	Fetal Lung	lung
32	chr10:93371800-93373400	Weak transcription	Stomach Smooth Muscle	stomach
33	chr10:93371800-93373600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr10:93371800-93373600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr10:93371800-93373600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr10:93372200-93374200	Enhancers	K562	blood
37	chr10:93372400-93373200	Enhancers	HSMM	muscle
38	chr10:93372400-93374200	Enhancers	NHLF	lung
39	chr10:93372800-93373600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr10:93372800-93374200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr10:93372800-93374200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
42	chr10:93372800-93374200	Flanking Active TSS	HSMMtube	muscle
43	chr10:93372800-93374400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr10:93372800-93374400	Enhancers	Fetal Stomach	stomach
45	chr10:93372800-93374400	Enhancers	HUVEC	blood vessel
46	chr10:93373000-93373200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr10:93373000-93373200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr10:93373000-93373200	Enhancers	A549	lung
49	chr10:93373000-93373600	Enhancers	Skeletal Muscle Female	skeletal muscle
50	chr10:93373000-93374000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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