Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:95596535..95599417-chr10:95653532..95655162,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000176273	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10430654	0.80[EUR][1000 genomes]
rs10430655	0.80[EUR][1000 genomes]
rs10786142	0.80[EUR][1000 genomes]
rs10786143	0.80[EUR][1000 genomes]
rs10882349	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10882350	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882352	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10882353	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10882354	0.82[EUR][1000 genomes]
rs11187693	0.80[EUR][1000 genomes]
rs11187695	0.80[EUR][1000 genomes]
rs11187698	0.80[EUR][1000 genomes]
rs11187700	0.80[EUR][1000 genomes]
rs11187710	0.81[EUR][1000 genomes]
rs17412233	0.80[EUR][1000 genomes]
rs17412253	0.80[EUR][1000 genomes]
rs1820362	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1986401	0.80[EUR][1000 genomes]
rs2901715	0.80[AMR][1000 genomes]
rs4919568	0.80[EUR][1000 genomes]
rs60994317	0.80[EUR][1000 genomes]
rs7097533	0.80[EUR][1000 genomes]
rs7474799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7899974	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7921176	0.80[EUR][1000 genomes]
rs919003	0.80[EUR][1000 genomes]
rs950086	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13320	chr10:95594800-95609228	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95594800-95599800	Enhancers	Fetal Intestine Large	intestine
2	chr10:95595200-95599800	Enhancers	Fetal Intestine Small	intestine
3	chr10:95597400-95599600	Enhancers	Duodenum Mucosa	Duodenum
4	chr10:95598000-95600800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr10:95598400-95601800	Weak transcription	Small Intestine	intestine

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