Variant report

Variant	rs1820362
Chromosome Location	chr10:95603242-95603243
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10430654	0.80[EUR][1000 genomes]
rs10430655	0.80[EUR][1000 genomes]
rs10748617	0.80[EUR][1000 genomes]
rs10786143	0.80[EUR][1000 genomes]
rs10882345	0.80[EUR][1000 genomes]
rs10882349	0.81[EUR][1000 genomes]
rs10882350	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10882351	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10882353	0.80[AFR][1000 genomes]
rs10882354	0.80[AFR][1000 genomes]
rs11187693	0.81[EUR][1000 genomes]
rs11187697	0.80[EUR][1000 genomes]
rs11187698	0.80[EUR][1000 genomes]
rs11187700	0.80[EUR][1000 genomes]
rs11187710	0.81[EUR][1000 genomes]
rs17412233	0.80[EUR][1000 genomes]
rs17412253	0.80[EUR][1000 genomes]
rs1986401	0.80[EUR][1000 genomes]
rs2901715	0.81[EUR][1000 genomes]
rs35298830	0.80[EUR][1000 genomes]
rs35640487	0.80[EUR][1000 genomes]
rs4919555	0.80[EUR][1000 genomes]
rs4919557	0.80[EUR][1000 genomes]
rs4919558	0.80[EUR][1000 genomes]
rs4919560	0.80[EUR][1000 genomes]
rs4919568	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs60994317	0.80[EUR][1000 genomes]
rs7090399	0.80[EUR][1000 genomes]
rs7093763	0.80[EUR][1000 genomes]
rs7094460	0.80[EUR][1000 genomes]
rs7094548	0.80[EUR][1000 genomes]
rs7094662	0.80[EUR][1000 genomes]
rs7094961	0.80[EUR][1000 genomes]
rs7097533	0.80[EUR][1000 genomes]
rs7474799	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7899974	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7913113	0.80[EUR][1000 genomes]
rs7913175	0.80[EUR][1000 genomes]
rs7913189	0.80[EUR][1000 genomes]
rs7921176	0.80[EUR][1000 genomes]
rs919003	0.80[EUR][1000 genomes]
rs950086	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13320	chr10:95594800-95609228	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95602400-95603400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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