The 2.0 version of rSNPBase

Variant report

Variant rs10890315
Chromosome Location chr1:45362445-45362446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45334600-45371800 Weak transcription Gastric stomach
2 chr1:45345600-45366200 Weak transcription Esophagus oesophagus
3 chr1:45345800-45363600 Weak transcription Colonic Mucosa Colon
4 chr1:45346400-45363200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:45347600-45362600 Weak transcription Lung lung
6 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:45350800-45363200 Weak transcription Right Ventricle heart
8 chr1:45350800-45363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:45350800-45364200 Weak transcription Colon Smooth Muscle Colon
10 chr1:45350800-45369000 Weak transcription Brain Angular Gyrus brain
11 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
12 chr1:45350800-45411800 Weak transcription Left Ventricle heart
13 chr1:45353000-45374000 Weak transcription Fetal Heart heart
14 chr1:45355200-45366400 Weak transcription Psoas Muscle Psoas
15 chr1:45355600-45368200 Weak transcription Fetal Stomach stomach
16 chr1:45355800-45363800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:45355800-45369000 Weak transcription Brain Cingulate Gyrus brain
18 chr1:45355800-45411200 Weak transcription Fetal Lung lung
19 chr1:45356000-45363600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:45356000-45369000 Weak transcription Brain Hippocampus Middle brain
21 chr1:45356000-45373000 Weak transcription Brain Anterior Caudate brain
22 chr1:45356000-45407000 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:45356000-45423800 Weak transcription Thymus Thymus
24 chr1:45356400-45390600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:45356600-45362600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:45356600-45364000 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr1:45356800-45374600 Weak transcription Spleen Spleen
28 chr1:45357200-45365000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:45357200-45388400 Weak transcription Fetal Intestine Large intestine
30 chr1:45357400-45364400 Weak transcription Fetal Brain Male brain
31 chr1:45357400-45365400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:45357400-45390600 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr1:45357400-45411800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:45357600-45365600 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:45357600-45391600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:45357800-45368200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:45357800-45391000 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:45358200-45363200 Strong transcription Primary T cells from cord blood blood
39 chr1:45358200-45363200 Strong transcription Liver Liver
40 chr1:45358200-45363400 Weak transcription Brain Germinal Matrix brain
41 chr1:45358200-45368800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:45358200-45396800 Weak transcription Fetal Intestine Small intestine
43 chr1:45359000-45369000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:45359000-45369000 Weak transcription Fetal Kidney kidney
45 chr1:45359000-45411800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:45359200-45364800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:45359200-45367200 Weak transcription Fetal Muscle Trunk muscle
48 chr1:45359200-45369000 Weak transcription HSMMtube muscle
49 chr1:45359200-45390200 Weak transcription HSMM muscle
50 chr1:45359200-45390600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015