Variant report

Variant	rs10898344
Chromosome Location	chr11:71292461-71292462
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
KRTAP5-14P	TF binding region
ENSG00000172890	Chromatin interaction
ENSG00000172893	Chromatin interaction
ENSG00000254682	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10751119	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	esv3372246	chr11:71223101-71435819	Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	nsv825988	chr11:71277262-71294289	ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv975851	chr11:71278888-71295301	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71290400-71293400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr11:71290400-71293600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:71291000-71293000	Enhancers	HepG2	liver
4	chr11:71291200-71292600	Weak transcription	Pancreas	Pancrea
5	chr11:71291200-71293000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr11:71291400-71295200	Weak transcription	Right Atrium	heart
7	chr11:71291600-71293800	Enhancers	Spleen	Spleen
8	chr11:71291800-71297000	Weak transcription	Fetal Intestine Large	intestine
9	chr11:71291800-71299000	Weak transcription	Gastric	stomach
10	chr11:71292000-71293000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr11:71292000-71293000	Weak transcription	Adipose Nuclei	Adipose
12	chr11:71292400-71294000	Enhancers	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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