The 2.0 version of rSNPBase

Variant report

Variant rs10913726
Chromosome Location chr1:179307047-179307048
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179264600-179310200 Weak transcription Brain Substantia Nigra brain
2 chr1:179264600-179314000 Weak transcription Brain Angular Gyrus brain
3 chr1:179264600-179314000 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:179264800-179313800 Weak transcription Brain Hippocampus Middle brain
5 chr1:179264800-179313800 Weak transcription Fetal Brain Female brain
6 chr1:179264800-179334200 Weak transcription Colon Smooth Muscle Colon
7 chr1:179266400-179322800 Weak transcription Small Intestine intestine
8 chr1:179268400-179312000 Weak transcription Fetal Thymus thymus
9 chr1:179272600-179313800 Weak transcription Brain Anterior Caudate brain
10 chr1:179273000-179311600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:179275600-179311600 Weak transcription HUVEC blood vessel
12 chr1:179280400-179314000 Weak transcription NHLF lung
13 chr1:179282000-179313000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:179282400-179313800 Weak transcription HSMMtube muscle
15 chr1:179283200-179308600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:179286400-179313800 Weak transcription Psoas Muscle Psoas
17 chr1:179290400-179310000 Weak transcription Aorta Aorta
18 chr1:179290600-179308800 Weak transcription Fetal Muscle Leg muscle
19 chr1:179290800-179314000 Weak transcription NHEK skin
20 chr1:179292200-179307200 Weak transcription Adipose Nuclei Adipose
21 chr1:179292400-179328000 Weak transcription Rectal Smooth Muscle rectum
22 chr1:179292600-179307400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:179293000-179311800 Weak transcription Fetal Kidney kidney
24 chr1:179293000-179322600 Weak transcription Fetal Heart heart
25 chr1:179293600-179313800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:179293800-179311800 Weak transcription HMEC breast
27 chr1:179293800-179314000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr1:179294200-179324600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:179295600-179309000 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr1:179295600-179314000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr1:179296800-179308600 Weak transcription NH-A brain
32 chr1:179296800-179327800 Weak transcription Colonic Mucosa Colon
33 chr1:179297400-179313600 Weak transcription Spleen Spleen
34 chr1:179297400-179321600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:179297800-179311800 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:179298600-179311400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:179298600-179324200 Weak transcription Thymus Thymus
38 chr1:179299400-179308600 Weak transcription Fetal Intestine Large intestine
39 chr1:179299400-179308600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:179299400-179310000 Weak transcription Primary B cells from peripheral blood blood
41 chr1:179299400-179316800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr1:179299600-179312400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:179300000-179308600 Weak transcription A549 lung
44 chr1:179300200-179308600 Weak transcription GM12878-XiMat blood
45 chr1:179300200-179313800 Weak transcription Primary B cells from cord blood blood
46 chr1:179300200-179314800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:179300400-179334600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr1:179300600-179322400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:179301800-179322800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:179302000-179307600 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015