Variant report
| Variant | rs10915816 |
|---|---|
| Chromosome Location | chr1:225562385-225562386 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:225552393..225554542-chr1:225560951..225562986,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs1011319 | 1.00[CEU][hapmap];0.87[EUR][1000 genomes] |
| rs11551874 | 0.85[CEU][hapmap] |
| rs11799479 | 0.83[TSI][hapmap] |
| rs12066771 | 0.83[ASN][1000 genomes] |
| rs17557867 | 0.83[CEU][hapmap];0.88[CHD][hapmap] |
| rs2230419 | 0.92[CEU][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes] |
| rs3766929 | 0.81[CEU][hapmap] |
| rs4576637 | 1.00[CEU][hapmap];0.82[JPT][hapmap] |
| rs4653635 | 0.92[CEU][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.92[TSI][hapmap];0.87[EUR][1000 genomes] |
| rs4999299 | 0.82[EUR][1000 genomes] |
| rs7406 | 1.00[CEU][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.93[TSI][hapmap];0.91[EUR][1000 genomes] |
| rs7551643 | 1.00[CEU][hapmap];0.82[JPT][hapmap];0.91[YRI][hapmap] |
| rs9783086 | 0.91[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
