Variant report

Variant	rs10918164
Chromosome Location	chr1:165356330-165356331
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10918162	0.82[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs10918163	0.84[ASN][1000 genomes]
rs10918165	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10918166	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10918167	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12143807	0.92[EUR][1000 genomes]
rs57548196	0.88[EUR][1000 genomes]
rs58454821	0.92[EUR][1000 genomes]
rs59154518	0.88[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165353600-165356400	Weak transcription	Adipose Nuclei	Adipose
2	chr1:165353600-165356400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr1:165353600-165356600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr1:165353600-165362400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:165353600-165362400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr1:165356000-165357800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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