Variant report

Variant	rs12143807
Chromosome Location	chr1:165367169-165367170
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165365790..165368850-chr1:165370089..165372761,3	K562	blood:

rs_ID	r²[population]
rs10918164	0.92[EUR][1000 genomes]
rs10918165	0.88[EUR][1000 genomes]
rs10918166	0.94[EUR][1000 genomes]
rs10918167	0.94[EUR][1000 genomes]
rs57548196	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58454821	0.91[EUR][1000 genomes]
rs59154518	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165362600-165371800	Weak transcription	Lung	lung
2	chr1:165362600-165378200	Weak transcription	Psoas Muscle	Psoas
3	chr1:165362800-165371800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:165362800-165371800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr1:165362800-165392200	Weak transcription	Brain Anterior Caudate	brain
6	chr1:165363000-165367400	Weak transcription	Fetal Lung	lung
7	chr1:165363000-165368000	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr1:165363600-165378400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr1:165365000-165370400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:165366000-165367800	Weak transcription	Fetal Muscle Trunk	muscle
11	chr1:165366800-165367200	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
12	chr1:165366800-165367600	Enhancers	H1 Cell Line	embryonic stem cell
13	chr1:165366800-165367600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr1:165366800-165367600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
15	chr1:165366800-165367800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr1:165366800-165367800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr1:165366800-165368000	Enhancers	Fetal Muscle Leg	muscle
18	chr1:165366800-165368000	Enhancers	HUVEC	blood vessel
19	chr1:165366800-165368200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr1:165366800-165368400	Enhancers	Adipose Nuclei	Adipose
21	chr1:165366800-165368400	Enhancers	Stomach Mucosa	stomach
22	chr1:165366800-165368400	Enhancers	NHDF-Ad	bronchial
23	chr1:165367000-165367200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr1:165367000-165367600	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr1:165367000-165367600	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr1:165367000-165367600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
27	chr1:165367000-165367600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr1:165367000-165367800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr1:165367000-165367800	Enhancers	NHLF	lung

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