Variant report

Variant	rs10930261
Chromosome Location	chr2:167885599-167885600
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11889300	1.00[CHB][hapmap]
rs11896680	1.00[CHB][hapmap]
rs16852932	1.00[CEU][hapmap]
rs16852940	1.00[CEU][hapmap]
rs17614686	1.00[CHB][hapmap]
rs55799453	0.87[ASN][1000 genomes]
rs58609316	0.87[ASN][1000 genomes]
rs59383854	0.87[ASN][1000 genomes]
rs59974653	0.83[ASN][1000 genomes]
rs73969936	0.81[ASN][1000 genomes]
rs73973533	0.81[ASN][1000 genomes]
rs73973535	0.83[ASN][1000 genomes]
rs73973536	0.83[ASN][1000 genomes]
rs73973539	0.83[ASN][1000 genomes]
rs7586191	1.00[ASW][hapmap];1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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