Variant report

Variant	rs73973533
Chromosome Location	chr2:167813001-167813002
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12616296	0.84[AFR][1000 genomes]
rs55799453	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58609316	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59383854	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59974653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73969936	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73973534	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73973535	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73973536	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73973539	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167813000-167813400	Enhancers	Primary T cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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