Variant report

Variant rs10935840
Chromosome Location chr3:151101083-151101084
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:151064600-151112400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr3:151065600-151109400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:151065600-151115200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:151069400-151129800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:151075600-151136400 Weak transcription Fetal Brain Female brain
6 chr3:151075800-151101200 Weak transcription Brain Cingulate Gyrus brain
7 chr3:151075800-151101400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:151079800-151105400 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr3:151080400-151101600 Weak transcription Brain Anterior Caudate brain
10 chr3:151080400-151105400 Weak transcription Fetal Muscle Leg muscle
11 chr3:151083000-151110400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:151084400-151101600 Weak transcription Brain Angular Gyrus brain
13 chr3:151084400-151109200 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr3:151086200-151102400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr3:151087600-151116000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:151088400-151101400 Weak transcription Brain Substantia Nigra brain
17 chr3:151090200-151142400 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:151091600-151105400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr3:151095400-151105800 Weak transcription Fetal Thymus thymus
20 chr3:151095400-151111000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:151095800-151102000 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr3:151096000-151129000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:151096600-151112400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr3:151097800-151107800 Weak transcription Fetal Muscle Trunk muscle
25 chr3:151097800-151108800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr3:151098200-151101600 Weak transcription Fetal Kidney kidney
27 chr3:151098600-151101600 Weak transcription Brain Germinal Matrix brain
28 chr3:151098800-151143400 Weak transcription H9 Cell Line embryonic stem cell
29 chr3:151099000-151103600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr3:151099200-151102800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:151099400-151105400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:151099400-151107600 Enhancers Primary B cells from peripheral blood blood
33 chr3:151099400-151109000 Weak transcription H1 Cell Line embryonic stem cell
34 chr3:151099600-151101400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:151099600-151101600 Enhancers Primary B cells from cord blood blood
36 chr3:151099600-151107600 Enhancers Primary monocytes fromperipheralblood blood
37 chr3:151099800-151101800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr3:151099800-151101800 Enhancers Fetal Intestine Small intestine
39 chr3:151099800-151103000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr3:151099800-151103400 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr3:151099800-151107800 Enhancers Primary neutrophils fromperipheralblood blood
42 chr3:151100000-151101600 Weak transcription NHLF lung
43 chr3:151100000-151102000 Enhancers Primary hematopoietic stem cells blood
44 chr3:151100000-151102600 Enhancers Fetal Intestine Large intestine
45 chr3:151100200-151103000 Enhancers Rectal Mucosa Donor 31 rectum
46 chr3:151100400-151101200 Enhancers Stomach Mucosa stomach
47 chr3:151100400-151101600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:151100400-151101600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr3:151100600-151102000 Strong transcription Placenta Placenta
50 chr3:151100600-151102000 Enhancers Sigmoid Colon Sigmoid Colon

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