Variant report

Variant	rs10936056
Chromosome Location	chr3:156752230-156752231
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156748321..156750998-chr3:156751698..156754095,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10804775	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10804776	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936044	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10936045	0.82[EUR][1000 genomes]
rs10936046	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10936047	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936049	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936050	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936051	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936052	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10936053	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11710103	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11714269	0.81[AMR][1000 genomes]
rs11920497	0.82[EUR][1000 genomes]
rs11927587	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11929637	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12491332	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12494440	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12629618	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12629809	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1871967	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2321457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2321458	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4680324	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4680325	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4680327	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73873779	0.84[ASN][1000 genomes]
rs9822976	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9837379	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349885	chr3:156685409-156878910	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156751400-156761200	Weak transcription	Colon Smooth Muscle	Colon

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