Variant report

Variant	rs10955661
Chromosome Location	chr8:114510738-114510739
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs12675690	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12680782	0.90[ASN][1000 genomes]
rs1533274	0.81[EUR][1000 genomes]
rs16884651	0.81[EUR][1000 genomes]
rs16884689	0.81[EUR][1000 genomes]
rs16884823	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16892653	0.86[ASN][1000 genomes]
rs1993895	0.81[EUR][1000 genomes]
rs2127057	0.81[EUR][1000 genomes]
rs4565485	0.81[ASN][1000 genomes]
rs55703524	0.94[ASN][1000 genomes]
rs55935867	0.93[ASN][1000 genomes]
rs62520075	0.94[ASN][1000 genomes]
rs62520076	0.88[ASN][1000 genomes]
rs62522269	0.96[ASN][1000 genomes]
rs72673263	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv831429	chr8:114438561-114595565	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114509400-114511000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr8:114509600-114510800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:114509800-114510800	Enhancers	Dnd41	blood
4	chr8:114509800-114511000	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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