Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10099644	0.81[CHB][hapmap];0.81[JPT][hapmap]
rs10955661	0.90[ASN][1000 genomes]
rs1513520	0.82[JPT][hapmap]
rs1533274	0.83[CHB][hapmap]
rs16884604	0.87[CHB][hapmap]
rs16884651	0.91[CHB][hapmap]
rs16884662	1.00[CEU][hapmap];0.82[CHB][hapmap]
rs16884689	0.86[CHB][hapmap]
rs16884700	0.92[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap]
rs16884823	1.00[ASN][1000 genomes]
rs16892653	0.85[EUR][1000 genomes]
rs2127057	0.86[CHB][hapmap]
rs2927867	0.82[JPT][hapmap]
rs4074797	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs55703524	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55935867	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62520075	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62520076	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62522269	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs719213	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs72673263	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv831429	chr8:114438561-114595565	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891332	chr8:114532488-114667112	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv891333	chr8:114552521-114643852	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114555200-114556200	Enhancers	Fetal Brain Male	brain

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