The 2.0 version of rSNPBase

Variant report

Variant rs10978798
Chromosome Location chr9:110102299-110102300
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:110070200-110104400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr9:110071400-110103000 Weak transcription Stomach Mucosa stomach
3 chr9:110087600-110103400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr9:110091000-110103000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:110093000-110103400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr9:110093200-110103200 Strong transcription A549 lung
7 chr9:110093200-110103400 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr9:110095000-110104600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr9:110095600-110103400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr9:110096000-110103400 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr9:110096200-110103200 Weak transcription Primary B cells from peripheral blood blood
12 chr9:110096200-110103400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr9:110096600-110103200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr9:110096600-110103400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr9:110096600-110103400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr9:110096800-110102600 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr9:110096800-110103400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr9:110096800-110103400 Weak transcription Rectal Smooth Muscle rectum
19 chr9:110096800-110107200 Weak transcription H1 Cell Line embryonic stem cell
20 chr9:110097000-110102600 Weak transcription Colonic Mucosa Colon
21 chr9:110097000-110103200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:110097000-110103200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr9:110097000-110103400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr9:110097000-110103400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr9:110097000-110103400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr9:110097000-110103400 Weak transcription Gastric stomach
27 chr9:110097000-110103600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:110097000-110103600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr9:110097000-110104600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr9:110097000-110107200 Weak transcription Fetal Kidney kidney
31 chr9:110097000-110107600 Weak transcription Primary hematopoietic stem cells blood
32 chr9:110097200-110103600 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr9:110097200-110113800 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr9:110097400-110103200 Weak transcription Primary B cells from cord blood blood
35 chr9:110097600-110103200 Weak transcription Fetal Thymus thymus
36 chr9:110097600-110103400 Weak transcription Primary T cells fromperipheralblood blood
37 chr9:110097800-110103200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr9:110097800-110103600 Weak transcription Hela-S3 cervix
39 chr9:110098000-110102400 Weak transcription Aorta Aorta
40 chr9:110098000-110103200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr9:110098000-110103200 Weak transcription K562 blood
42 chr9:110098600-110103400 Weak transcription HUVEC blood vessel
43 chr9:110099400-110107600 Weak transcription Adipose Nuclei Adipose
44 chr9:110100000-110106200 Weak transcription Psoas Muscle Psoas
45 chr9:110100600-110103600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr9:110100600-110112800 Weak transcription Esophagus oesophagus
47 chr9:110100800-110103200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr9:110100800-110103200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr9:110100800-110103200 Weak transcription Lung lung
50 chr9:110101000-110103200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015