Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10828127	0.83[EUR][1000 genomes]
rs10828143	0.94[ASN][1000 genomes]
rs11012311	0.83[EUR][1000 genomes]
rs11012314	0.85[CEU][hapmap];1.00[GIH][hapmap]
rs11012330	0.85[EUR][1000 genomes]
rs11012333	0.85[CEU][hapmap];1.00[GIH][hapmap];0.85[EUR][1000 genomes]
rs11012350	0.85[CEU][hapmap];1.00[GIH][hapmap];0.88[EUR][1000 genomes]
rs11012386	1.00[EUR][1000 genomes]
rs11012396	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11012397	0.95[EUR][1000 genomes]
rs11012398	0.95[EUR][1000 genomes]
rs12355062	0.85[CEU][hapmap]
rs12358478	0.85[CEU][hapmap];1.00[GIH][hapmap];0.80[EUR][1000 genomes]
rs12358488	0.85[CEU][hapmap]
rs16916785	0.85[CEU][hapmap];1.00[GIH][hapmap]
rs16916787	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs16916794	0.85[CEU][hapmap];1.00[GIH][hapmap]
rs67406532	0.85[EUR][1000 genomes]
rs72780045	0.88[EUR][1000 genomes]
rs72780046	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7893893	0.85[CEU][hapmap];1.00[GIH][hapmap]
rs7921720	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039655	chr10:18252931-18348954	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18331600-18348800	Weak transcription	H9 Cell Line	embryonic stem cell

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