Variant report

Variant	rs11013504
Chromosome Location	chr10:23746157-23746158
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23744620..23747012-chr10:23752553..23755040,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11013471	1.00[AFR][1000 genomes]
rs12248189	1.00[YRI][hapmap];1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831811	chr10:23734326-23913370	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23731600-23750600	Weak transcription	HSMMtube	muscle
2	chr10:23731800-23747800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:23732200-23747800	Weak transcription	NHEK	skin
4	chr10:23732600-23750400	Weak transcription	Brain Cingulate Gyrus	brain
5	chr10:23738200-23749400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr10:23739000-23750800	Weak transcription	Aorta	Aorta
7	chr10:23741400-23746600	Weak transcription	Psoas Muscle	Psoas
8	chr10:23741400-23748800	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr10:23741400-23751800	Weak transcription	Right Atrium	heart
10	chr10:23742400-23750600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr10:23742600-23746200	Weak transcription	Primary B cells from peripheral blood	blood
12	chr10:23744200-23746600	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr10:23745200-23748000	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr10:23745600-23746600	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr10:23745600-23746800	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr10:23745800-23746600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr10:23745800-23746800	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr10:23745800-23747000	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr10:23745800-23747000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr10:23746000-23746400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr10:23746000-23748600	Enhancers	Primary B cells from cord blood	blood

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