Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11027431	0.86[EUR][1000 genomes]
rs11027434	1.00[EUR][1000 genomes]
rs11027436	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11027437	1.00[EUR][1000 genomes]
rs11027438	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11027440	1.00[EUR][1000 genomes]
rs11027446	0.86[EUR][1000 genomes]
rs12269913	1.00[EUR][1000 genomes]
rs12274900	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12277987	0.86[EUR][1000 genomes]
rs12280993	1.00[EUR][1000 genomes]
rs12282955	1.00[EUR][1000 genomes]
rs12283754	1.00[EUR][1000 genomes]
rs12288125	1.00[EUR][1000 genomes]
rs12289552	1.00[EUR][1000 genomes]
rs12293059	0.86[EUR][1000 genomes]
rs12293404	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs12293501	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4344483	0.83[EUR][1000 genomes]
rs58045466	1.00[ASN][1000 genomes]
rs7108807	0.86[EUR][1000 genomes]
rs7126806	0.86[EUR][1000 genomes]
rs73435840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73435841	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553757	chr11:23564329-23896729	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv469942	chr11:23677246-23723766	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv897062	chr11:23687928-24031627	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv916840	chr11:23710275-24064119	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:23709200-23712800	Enhancers	Dnd41	blood
2	chr11:23709400-23711400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr11:23710200-23710800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr11:23710200-23710800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:23710200-23710800	Enhancers	HUVEC	blood vessel
6	chr11:23710400-23710600	Enhancers	HUES64 Cell Line	embryonic stem cell

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