Variant report

Variant	rs11032460
Chromosome Location	chr11:33967637-33967638
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:33948105..33950849-chr11:33966383..33968107,2	K562	blood:
2	chr11:33888357..33892105-chr11:33964462..33968020,5	K562	blood:
3	chr11:33966632..33969329-chr11:33975815..33978294,2	K562	blood:
4	chr11:33912899..33915259-chr11:33964492..33967818,4	K562	blood:
5	chr11:33965526..33968003-chr11:33987324..33990211,2	K562	blood:
6	chr11:33890797..33893921-chr11:33964154..33968546,4	K562	blood:
7	chr11:33967387..33969309-chr11:33978603..33980649,2	K562	blood:
8	chr11:33964506..33969329-chr11:33972347..33977315,5	K562	blood:
9	chr11:33892122..33894998-chr11:33965046..33967933,2	K562	blood:
10	chr11:33965884..33967709-chr11:34126187..34129376,3	K562	blood:

No data

No data

No data

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11032453	0.94[EUR][1000 genomes]
rs11032454	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11032456	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11032457	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11032459	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11032461	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7945864	0.94[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33957800-33972400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:33963800-33970200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr11:33965000-33974400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr11:33965200-33970600	Weak transcription	Lung	lung
5	chr11:33965400-33970200	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr11:33965400-33970600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:33965800-33970800	Weak transcription	GM12878-XiMat	blood
8	chr11:33967000-33968000	Enhancers	Fetal Intestine Small	intestine
9	chr11:33967200-33967800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr11:33967600-33967800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr11:33967600-33967800	Enhancers	Right Atrium	heart
12	chr11:33967600-33967800	Flanking Active TSS	K562	blood
13	chr11:33967600-33970200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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