The 2.0 version of rSNPBase

Variant report

Variant rs7945864
Chromosome Location chr11:33959549-33959550
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33944400-33960000 Weak transcription H9 Cell Line embryonic stem cell
2 chr11:33951000-33959800 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr11:33952800-33959600 Enhancers Primary monocytes fromperipheralblood blood
4 chr11:33953200-33959600 Enhancers Primary hematopoietic stem cells blood
5 chr11:33955000-33960000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr11:33955800-33961200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr11:33956200-33963200 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr11:33957600-33962800 Weak transcription Fetal Kidney kidney
9 chr11:33957800-33972400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr11:33958200-33959600 Flanking Active TSS K562 blood
11 chr11:33958200-33960000 Enhancers Fetal Heart heart
12 chr11:33958200-33960600 Enhancers Fetal Intestine Small intestine
13 chr11:33958400-33959600 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr11:33958400-33959800 Enhancers Fetal Intestine Large intestine
15 chr11:33958800-33961000 Weak transcription GM12878-XiMat blood
16 chr11:33959000-33962600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr11:33959200-33959600 Enhancers Monocytes-CD14+_RO01746 blood
18 chr11:33959200-33962800 Weak transcription Muscle Satellite Cultured Cells --
19 chr11:33959200-33963000 Weak transcription HSMM muscle
20 chr11:33959200-33963200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr11:33959200-33964200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr11:33959200-33964800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr11:33959400-33959600 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr11:33959400-33959600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr11:33959400-33960400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr11:33959400-33960400 Enhancers HUVEC blood vessel
27 chr11:33959400-33961800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr11:33959400-33961800 Weak transcription NH-A brain
29 chr11:33959400-33962000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr11:33959400-33962000 Weak transcription Placenta Placenta
31 chr11:33959400-33962000 Weak transcription Lung lung
32 chr11:33959400-33962200 Weak transcription Spleen Spleen
33 chr11:33959400-33962600 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr11:33959400-33962600 Weak transcription Fetal Muscle Trunk muscle
35 chr11:33959400-33962600 Weak transcription Fetal Muscle Leg muscle
36 chr11:33959400-33962600 Weak transcription Left Ventricle heart
37 chr11:33959400-33962800 Weak transcription Osteobl bone
38 chr11:33959400-33963000 Weak transcription NHEK skin
39 chr11:33959400-33963200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr11:33959400-33963200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:33959400-33963200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr11:33959400-33963200 Weak transcription Adipose Nuclei Adipose
43 chr11:33959400-33963200 Weak transcription Right Atrium heart
44 chr11:33959400-33963200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015