The 2.0 version of rSNPBase

Variant report

Variant rs11042053
Chromosome Location chr11:8751479-8751480
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8735400-8753400 Genic enhancers Breast Myoepithelial Primary Cells Breast
2 chr11:8736200-8773800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr11:8742600-8754000 Weak transcription Hela-S3 cervix
4 chr11:8744000-8752800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr11:8744000-8754200 Weak transcription A549 lung
6 chr11:8744200-8757600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr11:8744800-8753000 Weak transcription Adipose Nuclei Adipose
8 chr11:8744800-8753400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:8745000-8754400 Weak transcription Small Intestine intestine
10 chr11:8745600-8751600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr11:8745600-8754000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr11:8746000-8754200 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr11:8746200-8757400 Weak transcription H1 Cell Line embryonic stem cell
14 chr11:8746400-8757200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr11:8746600-8757200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr11:8746600-8783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:8747800-8751800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr11:8747800-8756400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:8748000-8751600 Genic enhancers Fetal Stomach stomach
20 chr11:8748000-8751800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr11:8748000-8752000 Enhancers Rectal Smooth Muscle rectum
22 chr11:8748800-8753000 Weak transcription Aorta Aorta
23 chr11:8748800-8754600 Weak transcription Fetal Thymus thymus
24 chr11:8749000-8754200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr11:8749400-8751600 Genic enhancers Fetal Lung lung
26 chr11:8749400-8753400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr11:8749400-8753600 Weak transcription HUVEC blood vessel
28 chr11:8749400-8754400 Weak transcription Duodenum Mucosa Duodenum
29 chr11:8749400-8754600 Weak transcription Fetal Kidney kidney
30 chr11:8750000-8751600 Enhancers Brain Inferior Temporal Lobe brain
31 chr11:8750000-8752800 Strong transcription Placenta Placenta
32 chr11:8750000-8753200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr11:8750200-8751600 Enhancers Brain Anterior Caudate brain
34 chr11:8750200-8752200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
35 chr11:8750200-8752600 Genic enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr11:8750200-8753200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr11:8750200-8753800 Strong transcription Fetal Intestine Small intestine
38 chr11:8750400-8751600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr11:8750400-8752600 Strong transcription Pancreas Pancrea
40 chr11:8750400-8752800 Strong transcription HMEC breast
41 chr11:8750400-8753200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr11:8750400-8753600 Strong transcription Fetal Muscle Trunk muscle
43 chr11:8750600-8751600 Strong transcription HepG2 liver
44 chr11:8750600-8751600 Strong transcription NHEK skin
45 chr11:8750600-8752600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr11:8750600-8752600 Weak transcription Brain Germinal Matrix brain
47 chr11:8750600-8752800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr11:8750600-8753000 Strong transcription Fetal Muscle Leg muscle
49 chr11:8750600-8753800 Weak transcription Brain Cingulate Gyrus brain
50 chr11:8750600-8754000 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015