Variant report

Variant	rs9736792
Chromosome Location	chr11:8589652-8589653
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11042053	1.00[CEU][hapmap]
rs7112416	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7122365	1.00[AMR][1000 genomes]
rs7935263	0.84[AFR][1000 genomes]
rs7937850	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7940343	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7940568	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7950679	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751035	chr11:8431654-8685451	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv896983	chr11:8526643-8682465	ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8588400-8589800	Enhancers	GM12878-XiMat	blood
2	chr11:8588400-8589800	Enhancers	NHEK	skin
3	chr11:8588400-8590000	Enhancers	Muscle Satellite Cultured Cells	--
4	chr11:8588400-8590000	Enhancers	HSMM	muscle
5	chr11:8588600-8589800	Enhancers	HMEC	breast
6	chr11:8588800-8589800	Enhancers	Hela-S3	cervix
7	chr11:8589000-8589800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr11:8589000-8589800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr11:8589000-8589800	Enhancers	NH-A	brain
10	chr11:8589000-8589800	Enhancers	Osteobl	bone
11	chr11:8589000-8590000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr11:8589200-8589800	Enhancers	HUVEC	blood vessel
13	chr11:8589200-8590000	Enhancers	NHDF-Ad	bronchial
14	chr11:8589400-8589800	Enhancers	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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