Variant report

Variant	rs11063177
Chromosome Location	chr12:4579106-4579107
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1029769	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10849083	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10849085	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10849086	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10849089	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs10849090	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs11063179	0.85[EUR][1000 genomes]
rs11063181	0.85[EUR][1000 genomes]
rs11063182	0.85[EUR][1000 genomes]
rs11063187	0.85[EUR][1000 genomes]
rs11063188	0.87[EUR][1000 genomes]
rs11063189	0.87[EUR][1000 genomes]
rs11063191	0.87[EUR][1000 genomes]
rs11063193	0.87[EUR][1000 genomes]
rs11063194	0.84[EUR][1000 genomes]
rs11063195	0.87[EUR][1000 genomes]
rs11063199	0.87[EUR][1000 genomes]
rs11063202	0.87[EUR][1000 genomes]
rs11063205	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11063206	0.83[EUR][1000 genomes]
rs11063207	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs11063213	0.84[EUR][1000 genomes]
rs11063214	0.84[EUR][1000 genomes]
rs11063215	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs11063217	0.83[EUR][1000 genomes]
rs12366731	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12367035	0.83[EUR][1000 genomes]
rs2907494	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2907495	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2907498	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2907499	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs2909380	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs2909381	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2970808	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2970810	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs2970812	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs2970818	0.82[CEU][hapmap]
rs4238020	0.83[EUR][1000 genomes]
rs4323977	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs60388479	0.83[EUR][1000 genomes]
rs61909580	0.84[EUR][1000 genomes]
rs73037770	0.84[EUR][1000 genomes]
rs7304949	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs9971700	0.80[EUR][1000 genomes]
rs9971728	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530520	chr12:3726841-4601757	Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv557123	chr12:4436632-4736569	Transcr. at gene 5' and 3' Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:4579000-4579200	Enhancers	Fetal Brain Male	brain

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