The 2.0 version of rSNPBase

Variant report

Variant rs61909580
Chromosome Location chr12:4595291-4595292
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:4586800-4596400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr12:4587200-4597200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr12:4587200-4597200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr12:4590000-4596200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr12:4590200-4597600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr12:4590800-4631200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr12:4591800-4596200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr12:4592400-4596400 Weak transcription Spleen Spleen
9 chr12:4592400-4647200 Weak transcription Esophagus oesophagus
10 chr12:4592600-4595600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr12:4592600-4596200 Weak transcription Left Ventricle heart
12 chr12:4592600-4597400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr12:4592600-4607800 Weak transcription Aorta Aorta
14 chr12:4593400-4597200 Weak transcription HUVEC blood vessel
15 chr12:4593400-4628600 Weak transcription Right Ventricle heart
16 chr12:4593600-4596200 Weak transcription HSMM muscle
17 chr12:4593600-4597200 Weak transcription Primary T cells from cord blood blood
18 chr12:4593600-4597200 Weak transcription Liver Liver
19 chr12:4593600-4597400 Weak transcription Fetal Thymus thymus
20 chr12:4593800-4596800 Weak transcription Primary T cells fromperipheralblood blood
21 chr12:4593800-4597400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr12:4594200-4596200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr12:4594200-4596600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr12:4594200-4597400 Weak transcription Thymus Thymus
25 chr12:4594400-4596200 Weak transcription Primary B cells from cord blood blood
26 chr12:4594400-4596200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr12:4594400-4596600 Enhancers HepG2 liver
28 chr12:4594400-4597200 Weak transcription Primary B cells from peripheral blood blood
29 chr12:4594400-4597200 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr12:4594400-4597200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:4594400-4597200 Weak transcription Osteobl bone
32 chr12:4594400-4597400 Weak transcription Dnd41 blood
33 chr12:4594400-4598000 Weak transcription Fetal Brain Female brain
34 chr12:4594400-4598800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr12:4594400-4615400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr12:4594400-4646400 Weak transcription NHLF lung
37 chr12:4594600-4596000 Weak transcription GM12878-XiMat blood
38 chr12:4594600-4596400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr12:4594600-4596400 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr12:4594600-4596600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr12:4594600-4597200 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr12:4594600-4597400 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr12:4594600-4598000 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr12:4594800-4596200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:4594800-4596600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr12:4594800-4597200 Weak transcription Adipose Nuclei Adipose
47 chr12:4594800-4597200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr12:4594800-4597200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr12:4594800-4597400 Weak transcription Duodenum Mucosa Duodenum
50 chr12:4594800-4597400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015