Variant report

Variant	rs11064918
Chromosome Location	chr12:120252038-120252039
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10849699	1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11064878	0.87[EUR][1000 genomes]
rs11064902	0.87[EUR][1000 genomes]
rs11064910	1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs11064913	1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11064915	1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11064920	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11064926	0.87[EUR][1000 genomes]
rs11064929	0.87[EUR][1000 genomes]
rs11064930	0.87[EUR][1000 genomes]
rs11064931	0.87[EUR][1000 genomes]
rs11064933	0.87[EUR][1000 genomes]
rs11064934	0.87[EUR][1000 genomes]
rs11064935	0.87[EUR][1000 genomes]
rs11064936	0.87[EUR][1000 genomes]
rs11064937	0.87[EUR][1000 genomes]
rs11064938	0.87[EUR][1000 genomes]
rs11064939	0.87[EUR][1000 genomes]
rs11064940	0.87[EUR][1000 genomes]
rs11064941	0.87[EUR][1000 genomes]
rs11064942	0.87[EUR][1000 genomes]
rs11064944	0.87[EUR][1000 genomes]
rs12231774	1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs280581	1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3742046	0.87[EUR][1000 genomes]
rs3809307	1.00[JPT][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55680945	0.87[EUR][1000 genomes]
rs57617020	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58261374	0.87[EUR][1000 genomes]
rs58974044	0.87[EUR][1000 genomes]
rs59953935	0.87[EUR][1000 genomes]
rs60782728	0.87[EUR][1000 genomes]
rs7295984	0.84[ASN][1000 genomes]
rs7966776	0.87[EUR][1000 genomes]
rs7971089	0.87[EUR][1000 genomes]
rs7975107	1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7978181	0.84[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120209400-120293600	Weak transcription	Primary T cells from cord blood	blood
2	chr12:120223000-120255800	Weak transcription	HepG2	liver
3	chr12:120223000-120314400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr12:120229400-120256600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr12:120241600-120276600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr12:120242600-120254200	Weak transcription	Fetal Muscle Trunk	muscle
7	chr12:120242600-120259800	Weak transcription	NH-A	brain
8	chr12:120242600-120260200	Weak transcription	HUVEC	blood vessel
9	chr12:120242600-120276600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr12:120242600-120276800	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr12:120242600-120279000	Weak transcription	Fetal Intestine Small	intestine
12	chr12:120242600-120279400	Weak transcription	Fetal Intestine Large	intestine
13	chr12:120242600-120293800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr12:120242600-120294400	Weak transcription	Fetal Kidney	kidney
15	chr12:120242800-120287800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr12:120243200-120288200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr12:120243400-120259400	Weak transcription	Cortex derived primary cultured neurospheres	brain
18	chr12:120245000-120256200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr12:120245000-120256200	Weak transcription	Fetal Heart	heart
20	chr12:120245200-120253800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr12:120245200-120273000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr12:120245200-120276400	Weak transcription	Fetal Muscle Leg	muscle
23	chr12:120245400-120253600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr12:120245400-120258400	Strong transcription	Dnd41	blood
25	chr12:120245600-120256000	Weak transcription	K562	blood
26	chr12:120245600-120256200	Weak transcription	H1 Cell Line	embryonic stem cell
27	chr12:120245600-120256200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr12:120245600-120285200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr12:120246600-120255400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr12:120247000-120257200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr12:120247000-120274600	Weak transcription	HMEC	breast
32	chr12:120247200-120254000	Weak transcription	Primary monocytes fromperipheralblood	blood
33	chr12:120247200-120256200	Weak transcription	HUES6 Cell Line	embryonic stem cell
34	chr12:120247200-120256200	Weak transcription	HSMM	muscle
35	chr12:120247200-120259800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr12:120247200-120274400	Weak transcription	NHEK	skin
37	chr12:120247200-120285800	Weak transcription	NHLF	lung
38	chr12:120247400-120254000	Weak transcription	Primary hematopoietic stem cells	blood
39	chr12:120247400-120254200	Weak transcription	NHDF-Ad	bronchial
40	chr12:120247400-120264400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr12:120247400-120285800	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr12:120247800-120254000	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr12:120247800-120272800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr12:120248000-120256200	Weak transcription	GM12878-XiMat	blood
45	chr12:120248200-120253800	Weak transcription	Monocytes-CD14+_RO01746	blood
46	chr12:120248200-120256600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr12:120248400-120254000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr12:120248400-120254200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
49	chr12:120248400-120254200	Weak transcription	Fetal Stomach	stomach
50	chr12:120248800-120253600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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