The 2.0 version of rSNPBase

Variant report

Variant rs11068371
Chromosome Location chr12:117588612-117588613
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:117572400-117596000 Weak transcription Fetal Brain Male brain
2 chr12:117578200-117617200 Strong transcription Fetal Stomach stomach
3 chr12:117578600-117591400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr12:117579000-117588800 Strong transcription Brain Germinal Matrix brain
5 chr12:117579000-117618200 Strong transcription Thymus Thymus
6 chr12:117579200-117602600 Weak transcription Psoas Muscle Psoas
7 chr12:117579200-117623000 Strong transcription Primary T cells from cord blood blood
8 chr12:117579400-117616800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr12:117579600-117590800 Weak transcription Muscle Satellite Cultured Cells --
10 chr12:117579600-117591800 Weak transcription NH-A brain
11 chr12:117580000-117593400 Weak transcription Small Intestine intestine
12 chr12:117580000-117625000 Strong transcription Primary T cells fromperipheralblood blood
13 chr12:117580000-117626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:117580400-117593600 Weak transcription HSMM muscle
15 chr12:117580400-117618800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr12:117580600-117588800 Strong transcription Sigmoid Colon Sigmoid Colon
17 chr12:117580600-117589600 Strong transcription Dnd41 blood
18 chr12:117580600-117625600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr12:117580800-117588800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:117580800-117589000 Strong transcription Fetal Muscle Trunk muscle
21 chr12:117580800-117590600 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr12:117581200-117618400 Strong transcription Primary monocytes fromperipheralblood blood
23 chr12:117581200-117624600 Strong transcription Duodenum Mucosa Duodenum
24 chr12:117581400-117624200 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr12:117581400-117625800 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr12:117581600-117593000 Strong transcription Fetal Intestine Large intestine
27 chr12:117581600-117618800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:117581800-117589400 Strong transcription Fetal Thymus thymus
29 chr12:117581800-117591600 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr12:117582000-117593200 Strong transcription Fetal Intestine Small intestine
31 chr12:117582000-117613200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:117582200-117606200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr12:117582200-117623400 Strong transcription Rectal Mucosa Donor 31 rectum
34 chr12:117582200-117625800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr12:117582400-117594000 Strong transcription Gastric stomach
36 chr12:117582400-117624400 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr12:117582600-117608400 Strong transcription Liver Liver
38 chr12:117582800-117591200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr12:117583200-117588800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:117583400-117589000 Strong transcription HepG2 liver
41 chr12:117583600-117588800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr12:117584000-117591600 Weak transcription Fetal Kidney kidney
43 chr12:117584000-117595400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr12:117584200-117590600 Weak transcription HMEC breast
45 chr12:117584200-117590800 Weak transcription Rectal Smooth Muscle rectum
46 chr12:117584200-117592200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr12:117584600-117591200 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr12:117584600-117591800 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr12:117585200-117589400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr12:117585400-117588800 Strong transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015