The 2.0 version of rSNPBase

Variant report

Variant rs12422378
Chromosome Location chr12:117594564-117594565
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:117572400-117596000 Weak transcription Fetal Brain Male brain
2 chr12:117578200-117617200 Strong transcription Fetal Stomach stomach
3 chr12:117579000-117618200 Strong transcription Thymus Thymus
4 chr12:117579200-117602600 Weak transcription Psoas Muscle Psoas
5 chr12:117579200-117623000 Strong transcription Primary T cells from cord blood blood
6 chr12:117579400-117616800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr12:117580000-117625000 Strong transcription Primary T cells fromperipheralblood blood
8 chr12:117580000-117626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr12:117580400-117618800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr12:117580600-117625600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr12:117581200-117618400 Strong transcription Primary monocytes fromperipheralblood blood
12 chr12:117581200-117624600 Strong transcription Duodenum Mucosa Duodenum
13 chr12:117581400-117624200 Strong transcription Primary T helper naive cells fromperipheralblood blood
14 chr12:117581400-117625800 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr12:117581600-117618800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr12:117582000-117613200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr12:117582200-117606200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr12:117582200-117623400 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr12:117582200-117625800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr12:117582400-117624400 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr12:117582600-117608400 Strong transcription Liver Liver
22 chr12:117584000-117595400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr12:117585600-117619000 Strong transcription Primary B cells from peripheral blood blood
24 chr12:117585600-117619800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:117585800-117600600 Strong transcription Primary B cells from cord blood blood
26 chr12:117585800-117602800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr12:117585800-117625600 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr12:117586800-117596000 Strong transcription Hela-S3 cervix
29 chr12:117588800-117618800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:117588800-117619000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr12:117589400-117604000 Weak transcription Fetal Heart heart
32 chr12:117589400-117623600 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr12:117589600-117614600 Strong transcription Lung lung
34 chr12:117589600-117619400 Strong transcription Brain Germinal Matrix brain
35 chr12:117589800-117601000 Strong transcription Brain Angular Gyrus brain
36 chr12:117589800-117618800 Strong transcription Fetal Brain Female brain
37 chr12:117590000-117595600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr12:117590000-117596000 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr12:117590000-117599000 Weak transcription Stomach Mucosa stomach
40 chr12:117590000-117602400 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr12:117590000-117626200 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr12:117590200-117600600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr12:117590200-117618800 Strong transcription Fetal Muscle Trunk muscle
44 chr12:117590200-117626800 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr12:117590600-117594600 Strong transcription NHEK skin
46 chr12:117590600-117599000 Strong transcription Ovary ovary
47 chr12:117590600-117602800 Strong transcription Brain Cingulate Gyrus brain
48 chr12:117590600-117606200 Strong transcription Colonic Mucosa Colon
49 chr12:117590600-117616600 Strong transcription Fetal Muscle Leg muscle
50 chr12:117590600-117618200 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015