Variant report

Variant rs11080620
Chromosome Location chr18:13029068-13029069
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12992600-13031200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr18:12995200-13042000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:12998400-13041600 Strong transcription Dnd41 blood
4 chr18:12999200-13039000 Strong transcription Fetal Thymus thymus
5 chr18:13000400-13034000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr18:13004800-13031800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr18:13005000-13039200 Strong transcription Primary B cells from peripheral blood blood
8 chr18:13005400-13033400 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr18:13006400-13034400 Strong transcription Rectal Mucosa Donor 29 rectum
10 chr18:13007200-13044000 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr18:13008000-13046000 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr18:13008400-13047200 Strong transcription Primary monocytes fromperipheralblood blood
13 chr18:13011400-13034000 Strong transcription Duodenum Smooth Muscle Duodenum
14 chr18:13011400-13038800 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr18:13011800-13033800 Strong transcription Primary B cells from cord blood blood
16 chr18:13013800-13031800 Weak transcription Pancreas Pancrea
17 chr18:13013800-13052000 Weak transcription Right Ventricle heart
18 chr18:13013800-13053200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr18:13014200-13029800 Weak transcription Colonic Mucosa Colon
20 chr18:13014200-13047200 Weak transcription Psoas Muscle Psoas
21 chr18:13015400-13036400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr18:13015600-13048800 Weak transcription Small Intestine intestine
23 chr18:13016400-13036200 Weak transcription Gastric stomach
24 chr18:13016600-13031800 Weak transcription Spleen Spleen
25 chr18:13016800-13031600 Weak transcription HSMMtube muscle
26 chr18:13016800-13053200 Weak transcription Esophagus oesophagus
27 chr18:13017000-13031000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr18:13017200-13056000 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr18:13017600-13042200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr18:13018400-13030800 Weak transcription Lung lung
31 chr18:13018400-13038400 Weak transcription H9 Cell Line embryonic stem cell
32 chr18:13018600-13117400 Weak transcription Stomach Mucosa stomach
33 chr18:13019000-13030000 Weak transcription Colon Smooth Muscle Colon
34 chr18:13020400-13029600 Weak transcription H1 Cell Line embryonic stem cell
35 chr18:13020400-13031400 Weak transcription Aorta Aorta
36 chr18:13020400-13033800 Strong transcription GM12878-XiMat blood
37 chr18:13020400-13034400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr18:13020600-13029600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr18:13020600-13029600 Weak transcription Brain Substantia Nigra brain
40 chr18:13020800-13029200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr18:13020800-13029800 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr18:13020800-13030400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr18:13021000-13030400 Weak transcription Brain Hippocampus Middle brain
44 chr18:13023000-13030200 Weak transcription Brain Anterior Caudate brain
45 chr18:13023200-13034400 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr18:13023400-13029800 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr18:13023400-13032600 Weak transcription Brain Angular Gyrus brain
48 chr18:13023800-13031800 Strong transcription Primary T cells fromperipheralblood blood
49 chr18:13023800-13033800 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr18:13023800-13037200 Strong transcription Primary mononuclear cells fromperipheralblood Blood

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