Variant report

Variant rs7229870
Chromosome Location chr18:12994468-12994469
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12990800-12994800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr18:12992000-13000600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr18:12992000-13004400 Weak transcription Esophagus oesophagus
4 chr18:12992200-13004800 Weak transcription Aorta Aorta
5 chr18:12992400-12994600 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr18:12992400-13000400 Weak transcription Fetal Muscle Trunk muscle
7 chr18:12992400-13000600 Weak transcription Placenta Placenta
8 chr18:12992400-13004400 Weak transcription H9 Cell Line embryonic stem cell
9 chr18:12992600-12994600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr18:12992600-12994800 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr18:12992600-12994800 Enhancers Primary T helper cells fromperipheralblood blood
12 chr18:12992600-13000400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr18:12992600-13031200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr18:12992800-12995000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr18:12992800-12996000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr18:12992800-12996400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr18:12992800-12997600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr18:12992800-13004000 Weak transcription Stomach Smooth Muscle stomach
19 chr18:12992800-13008800 Weak transcription Colonic Mucosa Colon
20 chr18:12992800-13009200 Weak transcription Brain Cingulate Gyrus brain
21 chr18:12992800-13013200 Weak transcription Fetal Kidney kidney
22 chr18:12992800-13016000 Weak transcription Placenta Amnion Placenta Amnion
23 chr18:12993000-12994600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr18:12993000-12994800 Enhancers Primary T helper cells PMA-I stimulated --
25 chr18:12993000-12994800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr18:12993000-12996400 Weak transcription Brain Anterior Caudate brain
27 chr18:12993000-12997000 Enhancers HepG2 liver
28 chr18:12993000-13001400 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr18:12993000-13006400 Weak transcription Fetal Brain Female brain
30 chr18:12993000-13023800 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr18:12993200-12995000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr18:12993200-12995800 Weak transcription Primary monocytes fromperipheralblood blood
33 chr18:12993200-12996400 Weak transcription Brain Hippocampus Middle brain
34 chr18:12993200-13000200 Weak transcription HSMM muscle
35 chr18:12993200-13000400 Weak transcription Adipose Nuclei Adipose
36 chr18:12993200-13001000 Weak transcription Fetal Intestine Large intestine
37 chr18:12993200-13001200 Weak transcription A549 lung
38 chr18:12993200-13004400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr18:12993200-13004800 Weak transcription Duodenum Mucosa Duodenum
40 chr18:12993200-13006800 Weak transcription HSMMtube muscle
41 chr18:12993200-13007000 Weak transcription Brain Substantia Nigra brain
42 chr18:12993200-13008400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr18:12993200-13008400 Weak transcription Osteobl bone
44 chr18:12993200-13008800 Weak transcription NHLF lung
45 chr18:12993400-12994800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr18:12993400-12995400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr18:12993400-12995400 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr18:12993400-12995600 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr18:12993400-12998200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr18:12993400-12998400 Weak transcription Fetal Lung lung

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