Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:114524848..114527263-chr1:114536709..114538580,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11102704	0.82[JPT][hapmap]
rs1158910	0.86[ASN][1000 genomes]
rs1158911	0.87[ASN][1000 genomes]
rs1158912	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12029644	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12029840	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1354373	0.87[ASN][1000 genomes]
rs17032011	0.81[JPT][hapmap]
rs17032048	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1806763	0.96[ASN][1000 genomes]
rs2358997	0.82[ASN][1000 genomes]
rs2358998	0.83[ASN][1000 genomes]
rs2359000	0.80[ASN][1000 genomes]
rs2884604	0.83[ASN][1000 genomes]
rs2938319	0.84[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2938320	0.87[ASN][1000 genomes]
rs3006981	0.84[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3006988	0.87[ASN][1000 genomes]
rs3006989	0.87[ASN][1000 genomes]
rs3006996	0.95[ASN][1000 genomes]
rs3006998	0.88[ASN][1000 genomes]
rs3006999	0.88[ASN][1000 genomes]
rs3007002	0.89[ASN][1000 genomes]
rs7520320	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs924778	0.96[ASN][1000 genomes]
rs937672	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752424	chr1:114189958-114712958	Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
2	esv2754686	chr1:114531958-114602958	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:114528200-114540800	Weak transcription	Fetal Lung	lung

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