The 2.0 version of rSNPBase

Variant report

Variant rs11115608
Chromosome Location chr12:83525764-83525765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:83516000-83526200 Weak transcription Fetal Intestine Small intestine
2 chr12:83516000-83533000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr12:83516200-83526000 Weak transcription Gastric stomach
4 chr12:83516400-83525800 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr12:83516400-83526000 Weak transcription Fetal Stomach stomach
6 chr12:83516400-83526000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr12:83516400-83538800 Weak transcription Fetal Brain Male brain
8 chr12:83516600-83526000 Weak transcription Fetal Muscle Trunk muscle
9 chr12:83516600-83532600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr12:83516600-83533400 Weak transcription Fetal Muscle Leg muscle
11 chr12:83516800-83528600 Weak transcription Adipose Nuclei Adipose
12 chr12:83517000-83525800 Weak transcription Brain Anterior Caudate brain
13 chr12:83517000-83526200 Weak transcription Brain Hippocampus Middle brain
14 chr12:83517200-83526200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr12:83517200-83528000 Weak transcription Brain Angular Gyrus brain
16 chr12:83517200-83528800 Weak transcription Brain Cingulate Gyrus brain
17 chr12:83517400-83526200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:83522200-83533800 Weak transcription Brain Germinal Matrix brain
19 chr12:83522400-83532200 Weak transcription Brain Substantia Nigra brain
20 chr12:83522600-83533200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr12:83522800-83526000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr12:83524000-83525800 Weak transcription Primary monocytes fromperipheralblood blood
23 chr12:83524000-83526000 Weak transcription Ovary ovary
24 chr12:83524000-83526200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr12:83524000-83526200 Weak transcription Fetal Lung lung
26 chr12:83524000-83526200 Weak transcription K562 blood
27 chr12:83524200-83525800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr12:83524400-83526000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr12:83524400-83530400 Weak transcription Left Ventricle heart
30 chr12:83524400-83533800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr12:83524600-83533600 Weak transcription Esophagus oesophagus
32 chr12:83524800-83527800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:83525000-83525800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr12:83525000-83526200 Weak transcription Colon Smooth Muscle Colon
35 chr12:83525000-83527800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:83525000-83529600 Weak transcription Stomach Smooth Muscle stomach
37 chr12:83525000-83529800 Weak transcription Rectal Smooth Muscle rectum
38 chr12:83525200-83527800 Weak transcription Fetal Intestine Large intestine
39 chr12:83525200-83536600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015