Variant report

Variant rs11145980
Chromosome Location chr9:139952311-139952312
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139949000-139963600 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:139949200-139962400 Weak transcription K562 blood
3 chr9:139949400-139952400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
4 chr9:139950400-139953400 Enhancers Rectal Mucosa Donor 29 rectum
5 chr9:139950600-139952400 Enhancers Cortex derived primary cultured neurospheres brain
6 chr9:139950600-139953400 Enhancers Rectal Mucosa Donor 31 rectum
7 chr9:139950600-139956400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr9:139950600-139962400 Weak transcription Esophagus oesophagus
9 chr9:139950800-139952400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:139950800-139952400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr9:139950800-139952400 Enhancers Stomach Smooth Muscle stomach
12 chr9:139950800-139953400 Enhancers Fetal Muscle Trunk muscle
13 chr9:139950800-139957000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr9:139950800-139958800 Weak transcription Ovary ovary
15 chr9:139950800-139959200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr9:139951400-139952400 Enhancers Placenta Placenta
17 chr9:139951400-139952400 Enhancers HSMM muscle
18 chr9:139951600-139952800 Enhancers Fetal Stomach stomach
19 chr9:139951600-139958200 Weak transcription Brain Angular Gyrus brain
20 chr9:139951600-139958400 Weak transcription Fetal Brain Female brain
21 chr9:139951800-139953400 Enhancers Fetal Muscle Leg muscle
22 chr9:139951800-139953600 Enhancers A549 lung
23 chr9:139951800-139953800 Enhancers HepG2 liver
24 chr9:139951800-139958000 Weak transcription Fetal Intestine Small intestine
25 chr9:139951800-139958200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr9:139951800-139958400 Weak transcription Brain Anterior Caudate brain
27 chr9:139951800-139959800 Weak transcription Duodenum Mucosa Duodenum
28 chr9:139952000-139952800 Weak transcription Brain Hippocampus Middle brain
29 chr9:139952000-139953200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr9:139952000-139958400 Weak transcription Liver Liver
31 chr9:139952000-139958400 Weak transcription Colonic Mucosa Colon
32 chr9:139952200-139964000 Weak transcription Sigmoid Colon Sigmoid Colon

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