Variant report

Variant rs28564792
Chromosome Location chr9:139900906-139900907
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139891400-139901000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr9:139891600-139911800 Weak transcription HSMMtube muscle
3 chr9:139892000-139921400 Weak transcription Right Atrium heart
4 chr9:139892400-139901200 Weak transcription Brain Anterior Caudate brain
5 chr9:139892800-139902200 Weak transcription Gastric stomach
6 chr9:139892800-139906800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr9:139893000-139904200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr9:139893000-139905600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr9:139895000-139902200 Weak transcription Placenta Amnion Placenta Amnion
10 chr9:139895000-139902600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr9:139895000-139904200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr9:139895000-139904600 Weak transcription K562 blood
13 chr9:139895000-139906400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr9:139895000-139909800 Weak transcription Primary T cells from cord blood blood
15 chr9:139895000-139921400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr9:139895200-139901400 Weak transcription Fetal Lung lung
17 chr9:139895200-139909600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr9:139895400-139901000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr9:139895400-139901800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr9:139895400-139904000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr9:139895400-139904000 Weak transcription Esophagus oesophagus
22 chr9:139895400-139905600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr9:139895400-139910600 Weak transcription Thymus Thymus
24 chr9:139895400-139921000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr9:139895400-139921600 Weak transcription Primary hematopoietic stem cells blood
26 chr9:139895800-139901000 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr9:139895800-139901200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr9:139895800-139902200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr9:139896800-139901800 Weak transcription A549 lung
30 chr9:139896800-139904000 Weak transcription Liver Liver
31 chr9:139896800-139909000 Weak transcription Primary B cells from peripheral blood blood
32 chr9:139897000-139901400 Weak transcription Hela-S3 cervix
33 chr9:139897600-139901000 Weak transcription Fetal Brain Female brain
34 chr9:139898600-139901000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr9:139899400-139901200 Weak transcription Brain Substantia Nigra brain
36 chr9:139899400-139902200 Weak transcription Adipose Nuclei Adipose
37 chr9:139899400-139904000 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr9:139899400-139918400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr9:139899600-139904000 Weak transcription Left Ventricle heart
40 chr9:139899600-139904000 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr9:139899800-139901600 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr9:139900000-139901000 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr9:139900200-139901200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr9:139900200-139901200 Bivalent Enhancer Fetal Muscle Trunk muscle
45 chr9:139900200-139902600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr9:139900400-139901000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr9:139900400-139901000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr9:139900400-139901000 Enhancers Small Intestine intestine
49 chr9:139900400-139901200 Enhancers Osteobl bone
50 chr9:139900400-139901400 ZNF genes & repeats Fetal Intestine Small intestine

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