Variant report

Variant rs11152999
Chromosome Location chr6:106960447-106960448
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106957000-106962800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:106957200-106961200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
3 chr6:106957200-106961600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
4 chr6:106957200-106962800 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr6:106957400-106962200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:106957400-106963400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
7 chr6:106957600-106961000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
8 chr6:106957800-106961400 Active TSS Right Atrium heart
9 chr6:106958000-106961000 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
10 chr6:106958200-106961200 Active TSS NHDF-Ad bronchial
11 chr6:106958400-106962000 Active TSS GM12878-XiMat blood
12 chr6:106958400-106962200 Active TSS Sigmoid Colon Sigmoid Colon
13 chr6:106958600-106961000 Active TSS Aorta Aorta
14 chr6:106958600-106961000 Active TSS Gastric stomach
15 chr6:106958600-106961400 Bivalent/Poised TSS Psoas Muscle Psoas
16 chr6:106958800-106961200 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
17 chr6:106958800-106961600 Active TSS Pancreatic Islets Pancreatic Islet
18 chr6:106959000-106960800 Bivalent Enhancer Fetal Brain Male brain
19 chr6:106959000-106960800 Active TSS Thymus Thymus
20 chr6:106959000-106961000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
21 chr6:106959200-106961000 Active TSS HSMMtube muscle
22 chr6:106959200-106962200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
23 chr6:106959400-106960600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:106959400-106960600 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
25 chr6:106959400-106960600 Bivalent/Poised TSS A549 lung
26 chr6:106959400-106960800 Active TSS Primary T killer naive cells fromperipheralblood blood
27 chr6:106959400-106960800 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
28 chr6:106959400-106960800 Active TSS HepG2 liver
29 chr6:106959400-106961000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:106959400-106961000 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
31 chr6:106959400-106961000 Active TSS Breast Myoepithelial Primary Cells Breast
32 chr6:106959400-106961000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
33 chr6:106959400-106961000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:106959400-106961000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
35 chr6:106959400-106961000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
36 chr6:106959400-106961000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
37 chr6:106959400-106961000 Active TSS Ovary ovary
38 chr6:106959400-106961200 Bivalent/Poised TSS Fetal Kidney kidney
39 chr6:106959400-106961800 Active TSS Primary monocytes fromperipheralblood blood
40 chr6:106959400-106962200 Active TSS Primary T killer memory cells from peripheral blood blood
41 chr6:106959600-106960800 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr6:106959600-106960800 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
43 chr6:106959600-106960800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:106959600-106960800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
45 chr6:106959600-106960800 Bivalent/Poised TSS Brain Substantia Nigra brain
46 chr6:106959600-106961000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr6:106959600-106961000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
48 chr6:106959600-106961000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
49 chr6:106959600-106961000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
50 chr6:106959600-106961000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --

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