Variant report
| Variant | rs11154396 |
|---|---|
| Chromosome Location | chr6:127638911-127638912 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:127605000-127660800 | Weak transcription | Hela-S3 | cervix |
| 2 | chr6:127608800-127646800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr6:127608800-127646800 | Weak transcription | Lung | lung |
| 4 | chr6:127608800-127652800 | Weak transcription | Esophagus | oesophagus |
| 5 | chr6:127608800-127653600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr6:127608800-127653600 | Weak transcription | Pancreas | Pancrea |
| 7 | chr6:127608800-127654600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 8 | chr6:127608800-127661400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr6:127608800-127663600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr6:127608800-127663600 | Weak transcription | Gastric | stomach |
| 11 | chr6:127609000-127646200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr6:127611400-127645600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 13 | chr6:127613000-127640000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 14 | chr6:127613000-127661000 | Weak transcription | Small Intestine | intestine |
| 15 | chr6:127613400-127646200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 16 | chr6:127614600-127659200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 17 | chr6:127616600-127645800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 18 | chr6:127618800-127647200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr6:127620400-127647000 | Weak transcription | Left Ventricle | heart |
| 20 | chr6:127621800-127646400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 21 | chr6:127621800-127661000 | Weak transcription | Fetal Heart | heart |
| 22 | chr6:127622000-127645200 | Weak transcription | HMEC | breast |
| 23 | chr6:127622000-127645600 | Weak transcription | HSMMtube | muscle |
| 24 | chr6:127622000-127646800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 25 | chr6:127622000-127646800 | Weak transcription | Aorta | Aorta |
| 26 | chr6:127622000-127649400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr6:127622000-127661400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr6:127622000-127661400 | Weak transcription | NHEK | skin |
| 29 | chr6:127622800-127661400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 30 | chr6:127622800-127662600 | Weak transcription | Fetal Brain Male | brain |
| 31 | chr6:127623000-127649200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 32 | chr6:127624000-127646400 | Weak transcription | HUVEC | blood vessel |
| 33 | chr6:127625600-127646000 | Weak transcription | Thymus | Thymus |
| 34 | chr6:127625600-127661400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 35 | chr6:127626000-127646000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 36 | chr6:127627400-127639200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 37 | chr6:127627400-127659000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr6:127627800-127645800 | Weak transcription | Brain Germinal Matrix | brain |
| 39 | chr6:127627800-127646800 | Weak transcription | Fetal Intestine Small | intestine |
| 40 | chr6:127628000-127653000 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr6:127629400-127644800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr6:127629800-127661200 | Weak transcription | A549 | lung |
| 43 | chr6:127630200-127642600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 44 | chr6:127630400-127646000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 45 | chr6:127630400-127647200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 46 | chr6:127630600-127647200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 47 | chr6:127630800-127649200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 48 | chr6:127630800-127649600 | Strong transcription | Dnd41 | blood |
| 49 | chr6:127630800-127649800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 50 | chr6:127631000-127640200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
