Variant report

Variant	rs11161462
Chromosome Location	chr1:85278665-85278666
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11161464	0.87[CHB][hapmap];0.86[CHD][hapmap];0.83[JPT][hapmap];0.81[MKK][hapmap]
rs9662096	0.91[ASW][hapmap];0.88[CEU][hapmap];0.90[CHD][hapmap];0.84[GIH][hapmap];0.93[MKK][hapmap];0.82[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs9727725	0.81[GIH][hapmap];0.90[MKK][hapmap]
rs9729018	0.88[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];0.89[JPT][hapmap];0.86[MEX][hapmap];0.92[MKK][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85264000-85295600	Weak transcription	NHEK	skin
2	chr1:85266400-85287200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr1:85277000-85285400	Weak transcription	Left Ventricle	heart
4	chr1:85277200-85284800	Weak transcription	Fetal Heart	heart
5	chr1:85278200-85287200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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