The 2.0 version of rSNPBase

Variant report

Variant rs11161468
Chromosome Location chr1:76192582-76192583
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76189800-76193400 Active TSS K562 blood
2 chr1:76189800-76194200 Active TSS GM12878-XiMat blood
3 chr1:76190800-76192600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:76190800-76199400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:76190800-76207200 Weak transcription Spleen Spleen
6 chr1:76190800-76208000 Weak transcription Gastric stomach
7 chr1:76191000-76199000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:76191200-76192600 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:76191200-76193000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr1:76191200-76193000 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr1:76191200-76193800 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr1:76191200-76197600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:76191200-76219600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:76191400-76192800 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr1:76191400-76194000 Enhancers Primary T helper cells fromperipheralblood blood
16 chr1:76191400-76199200 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:76191400-76199400 Weak transcription Aorta Aorta
18 chr1:76191600-76192800 Enhancers Primary hematopoietic stem cells blood
19 chr1:76191600-76193400 Enhancers Primary B cells from cord blood blood
20 chr1:76191800-76192800 Enhancers Fetal Muscle Leg muscle
21 chr1:76191800-76193400 Weak transcription Brain Cingulate Gyrus brain
22 chr1:76191800-76195800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:76191800-76208000 Weak transcription A549 lung
24 chr1:76191800-76208200 Weak transcription Brain Substantia Nigra brain
25 chr1:76191800-76209400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:76192000-76192600 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr1:76192000-76192600 Flanking Active TSS HepG2 liver
28 chr1:76192000-76192600 Enhancers NHEK skin
29 chr1:76192000-76193200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:76192000-76193400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:76192000-76193400 Weak transcription Pancreas Pancrea
32 chr1:76192000-76193400 Weak transcription Right Ventricle heart
33 chr1:76192000-76193600 Weak transcription Esophagus oesophagus
34 chr1:76192000-76193800 Enhancers Fetal Brain Female brain
35 chr1:76192000-76193800 Enhancers Psoas Muscle Psoas
36 chr1:76192000-76195200 Weak transcription Fetal Stomach stomach
37 chr1:76192000-76195800 Weak transcription Left Ventricle heart
38 chr1:76192000-76196200 Weak transcription Fetal Thymus thymus
39 chr1:76192000-76196400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:76192000-76197400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:76192000-76198600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:76192000-76198600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:76192000-76198600 Weak transcription HSMMtube muscle
44 chr1:76192000-76199400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:76192000-76199400 Weak transcription Lung lung
46 chr1:76192000-76208000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:76192000-76210200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:76192000-76220400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:76192000-76220600 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr1:76192000-76227800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015