The 2.0 version of rSNPBase

Variant report

Variant rs2788654
Chromosome Location chr1:76219569-76219570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76191200-76219600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:76192000-76220400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:76192000-76220600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:76192000-76227800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:76192200-76222000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr1:76193600-76220200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:76193800-76220200 Weak transcription Fetal Heart heart
8 chr1:76195600-76219600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:76196000-76222000 Strong transcription Liver Liver
10 chr1:76199600-76220400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:76202000-76225000 Weak transcription Stomach Mucosa stomach
12 chr1:76203400-76230800 Weak transcription NHDF-Ad bronchial
13 chr1:76204800-76229000 Weak transcription Psoas Muscle Psoas
14 chr1:76208600-76223800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:76208800-76220400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:76208800-76231400 Weak transcription A549 lung
17 chr1:76208800-76231400 Weak transcription NHEK skin
18 chr1:76208800-76231600 Weak transcription Hela-S3 cervix
19 chr1:76209000-76220200 Weak transcription Fetal Kidney kidney
20 chr1:76209000-76230800 Weak transcription HUVEC blood vessel
21 chr1:76209000-76230800 Weak transcription NHLF lung
22 chr1:76209400-76220400 Weak transcription Colonic Mucosa Colon
23 chr1:76210200-76220200 Weak transcription Right Ventricle heart
24 chr1:76210200-76220400 Weak transcription Rectal Smooth Muscle rectum
25 chr1:76210200-76223000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:76210200-76231800 Weak transcription HSMMtube muscle
27 chr1:76210400-76219600 Weak transcription Primary hematopoietic stem cells blood
28 chr1:76210400-76219600 Weak transcription Aorta Aorta
29 chr1:76210400-76220200 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:76210400-76220200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:76210600-76220000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:76210600-76220200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:76210600-76220400 Weak transcription Brain Angular Gyrus brain
34 chr1:76210600-76220400 Weak transcription Brain Cingulate Gyrus brain
35 chr1:76210600-76220400 Weak transcription Esophagus oesophagus
36 chr1:76211200-76220200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:76211600-76220200 Weak transcription Brain Substantia Nigra brain
38 chr1:76211600-76230800 Weak transcription HMEC breast
39 chr1:76213200-76221600 Strong transcription Fetal Muscle Trunk muscle
40 chr1:76214200-76220200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:76214200-76221800 Strong transcription Adipose Nuclei Adipose
42 chr1:76214400-76221600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:76215000-76221600 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr1:76215000-76221800 Strong transcription Primary T cells from cord blood blood
45 chr1:76215400-76220200 Strong transcription Fetal Muscle Leg muscle
46 chr1:76215400-76220400 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr1:76215400-76221600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:76215600-76219800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:76215600-76220000 Strong transcription Primary monocytes fromperipheralblood blood
50 chr1:76215600-76220200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015