The 2.0 version of rSNPBase

Variant report

Variant rs11161824
Chromosome Location chr1:86902460-86902461
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86890600-86903000 Weak transcription Esophagus oesophagus
2 chr1:86896600-86902600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:86896600-86914400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr1:86897200-86922600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:86897200-86922800 Strong transcription HMEC breast
6 chr1:86897400-86906200 Strong transcription NHEK skin
7 chr1:86897400-86916000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:86902000-86913200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:86902200-86905800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:86902200-86906800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr1:86902200-86907200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:86902400-86907000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:86902400-86907400 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015