The 2.0 version of rSNPBase

Variant report

Variant rs11162523
Chromosome Location chr1:79130372-79130373
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:79117000-79132800 Weak transcription Fetal Brain Male brain
2 chr1:79117400-79130400 Weak transcription Pancreas Pancrea
3 chr1:79117400-79130600 Weak transcription Hela-S3 cervix
4 chr1:79117400-79131200 Weak transcription HSMM muscle
5 chr1:79117400-79144000 Weak transcription Esophagus oesophagus
6 chr1:79117400-79144000 Weak transcription Spleen Spleen
7 chr1:79117600-79153000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:79118400-79130800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:79118400-79130800 Weak transcription Small Intestine intestine
10 chr1:79118600-79130800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:79119200-79130800 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr1:79119400-79130400 Strong transcription Primary monocytes fromperipheralblood blood
13 chr1:79119800-79130800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:79119800-79130800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:79119800-79132600 Weak transcription Right Ventricle heart
16 chr1:79124800-79134000 Weak transcription NHDF-Ad bronchial
17 chr1:79125000-79130600 Strong transcription Adipose Nuclei Adipose
18 chr1:79125400-79133000 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:79126200-79131000 Weak transcription Primary B cells from peripheral blood blood
20 chr1:79126200-79131200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:79126400-79138000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:79126600-79130800 Weak transcription Fetal Brain Female brain
23 chr1:79126600-79148000 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:79127400-79130600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:79128000-79130400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:79128600-79131400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:79129000-79130800 Weak transcription Fetal Thymus thymus
28 chr1:79129000-79131000 Weak transcription Thymus Thymus
29 chr1:79129000-79132800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:79129000-79138200 Weak transcription Lung lung
31 chr1:79129200-79131000 Weak transcription Fetal Lung lung
32 chr1:79129200-79132600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:79129200-79143800 Weak transcription Brain Hippocampus Middle brain
34 chr1:79129400-79131000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:79129400-79131000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr1:79129400-79131000 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:79129400-79131000 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:79129400-79131000 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr1:79129400-79131200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:79129400-79131200 Weak transcription HSMMtube muscle
41 chr1:79129400-79132000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:79129400-79132000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr1:79129400-79132200 Weak transcription Primary hematopoietic stem cells blood
44 chr1:79129400-79132200 Weak transcription Duodenum Mucosa Duodenum
45 chr1:79129400-79133000 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:79129400-79133400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:79129400-79135800 Weak transcription Left Ventricle heart
48 chr1:79129400-79137600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr1:79129400-79138200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:79129400-79138200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015