The 2.0 version of rSNPBase

Variant report

Variant rs975987
Chromosome Location chr1:79135534-79135535
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:79117400-79144000 Weak transcription Esophagus oesophagus
2 chr1:79117400-79144000 Weak transcription Spleen Spleen
3 chr1:79117600-79153000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:79126400-79138000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:79126600-79148000 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:79129000-79138200 Weak transcription Lung lung
7 chr1:79129200-79143800 Weak transcription Brain Hippocampus Middle brain
8 chr1:79129400-79135800 Weak transcription Left Ventricle heart
9 chr1:79129400-79137600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:79129400-79138200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:79129400-79138200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:79129400-79138600 Weak transcription Fetal Muscle Leg muscle
13 chr1:79129400-79139800 Weak transcription Primary T cells from cord blood blood
14 chr1:79129400-79144000 Weak transcription Ovary ovary
15 chr1:79129600-79141800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:79130000-79141200 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr1:79130200-79141800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:79130800-79135600 Weak transcription GM12878-XiMat blood
19 chr1:79130800-79144000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015