Variant report

Variant	rs11163852
Chromosome Location	chr1:84293687-84293688
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1010435	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163846	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1159534	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12071675	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12082164	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12083999	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3850438	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4628522	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7531463	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84281400-84316600	Weak transcription	Pancreas	Pancrea
2	chr1:84285800-84305000	Weak transcription	Liver	Liver
3	chr1:84290200-84294200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr1:84293000-84293800	Enhancers	Adipose Nuclei	Adipose
5	chr1:84293000-84293800	Enhancers	Fetal Lung	lung
6	chr1:84293000-84294200	Enhancers	Ovary	ovary
7	chr1:84293000-84294800	Enhancers	Fetal Heart	heart
8	chr1:84293000-84294800	Weak transcription	Fetal Muscle Leg	muscle
9	chr1:84293400-84294000	Enhancers	Fetal Stomach	stomach
10	chr1:84293400-84296200	Enhancers	Placenta	Placenta
11	chr1:84293600-84293800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr1:84293600-84294200	Enhancers	Small Intestine	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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