Variant report

Variant	rs1159534
Chromosome Location	chr1:84281552-84281553
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1010435	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11163846	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11163852	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12071675	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12082164	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12083999	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3850438	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4628522	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6576946	0.80[ASN][1000 genomes]
rs6576947	0.82[ASN][1000 genomes]
rs7531463	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs761405	0.82[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84279800-84282800	Enhancers	Liver	Liver
2	chr1:84280800-84281600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:84280800-84282000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr1:84281000-84281600	Enhancers	Fetal Heart	heart
5	chr1:84281000-84281600	Enhancers	NHDF-Ad	bronchial
6	chr1:84281000-84281800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr1:84281000-84281800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr1:84281000-84281800	Enhancers	Adipose Nuclei	Adipose
9	chr1:84281000-84281800	Enhancers	Fetal Muscle Leg	muscle
10	chr1:84281200-84281600	Enhancers	Fetal Stomach	stomach
11	chr1:84281200-84281800	Enhancers	Aorta	Aorta
12	chr1:84281200-84281800	Enhancers	Left Ventricle	heart
13	chr1:84281200-84281800	Enhancers	Right Atrium	heart
14	chr1:84281200-84283600	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr1:84281400-84316600	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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